Real-time RT-PCR internal quality control optimization for qualitative detection of SARS-CoV-2

Authors

  • Giancarlo Torres-Gamarra Escuela Académico Profesional de Tecnología Médica, Facultad de Ciencias de la Salud, Universidad Nacional Hermilio Valdizán (UNHEVAL). Huánuco-Perú

DOI:

https://doi.org/10.35434/rcmhnaaa.2023.161.1657

Keywords:

Optimization, Internal quality control, Real-time RT-PCR, SARS-CoV-2

Abstract

Objective: To optimize the internal quality control of real-time RT-PCR for the qualitative detection of SARS-CoV-2, using the Cq values ​​of negative and positive controls. Material and method: Prospective-longitudinal study. The sample consisted of 143 Cq values ​​for the negative aliquot and extraction controls, as well as for the positive control. The normal distribution of Cq values ​​was analyzed using the Anderson-Darling (AD) test and randomness tests were applied. Control limits were calculated from 51 Cq values, and then, using control charts, to monitor 92 Cq values ​​obtained from November 2020 to March 2021. Lot acceptance and Cpk indices were evaluated as optimization indicators. The calculations were made with the Minitab program. Results: The batches of Cq values ​​were accepted and Cpk indices higher than 1.33 were obtained for the three types of control. Discussion: There are no published studies that apply statistical quality control to the qualitative detection of SARS-CoV-2. Conclusions: It is possible to use the Cq values ​​of the controls to optimize the internal quality control of real-time RT-PCR for qualitative detection of SARS-CoV-2, as if it were a quantitative technique.

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Author Biography

Giancarlo Torres-Gamarra, Escuela Académico Profesional de Tecnología Médica, Facultad de Ciencias de la Salud, Universidad Nacional Hermilio Valdizán (UNHEVAL). Huánuco-Perú

1. Tecnólogo médico

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Published

2023-06-18

How to Cite

1.
Torres-Gamarra G. Real-time RT-PCR internal quality control optimization for qualitative detection of SARS-CoV-2. Rev. Cuerpo Med. HNAAA [Internet]. 2023 Jun. 18 [cited 2024 Nov. 21];16(1):71-7. Available from: https://cmhnaaa.org.pe/ojs/index.php/rcmhnaaa/article/view/1657